BICDL1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BICDL1 mutation is significantly associated with the RNA expression of many other genes, with 1,056 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible BICDL1-associated genes across cancer lineages are GMNN, SDHB, and NUSAP1. Each is linked with BICDL1 in more than 2 cancer types. Because this analysis shows association rather than direction, both BICDL1-to-partner and partner-to-BICDL1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GMNN grouped by BICDL1-low versus BICDL1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BICDL1→partner) and Y-score (partner→BICDL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECGMNN →+0.563+2.091.003.00133
UCECSDHB →+0.373+2.455.003.00133
UCECNUSAP1 →+0.658+2.070.002.00133
UCECMRPL40 →+0.408+1.779<.001.00433
UCECRRM2 →+0.918+2.070<.001.00133
UCECCDC45 →+0.640+2.103.001.00333
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,056 associations by consensus.

GMNN by BICDL1 expression — UCEC

Box plot of GMNN in BICDL1-low vs BICDL1-high samples in UCEC.

Explore this box plot interactively →

Exploration