BFAR

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BFAR protein abundance is significantly associated with the RNA expression of many other genes, with 1,055 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible BFAR-associated genes across cancer lineages are ACOX3, TTYH2, and TAGLN2. Each is linked with BFAR in more than 1 cancer types. Because this analysis shows association rather than direction, both BFAR-to-partner and partner-to-BFAR results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BFAR versus ACOX3 in CCRCC, with a Pearson correlation of 0.94.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BFAR→partner) and Y-score (partner→BFAR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCACOX3 →+0.413+0.966.002.00332
HNSCTTYH2 →+0.821+0.483.006.00432
LUADTAGLN2 →+1.007+0.677.001.00232
HNSCROR2 →+2.457+0.700<.001.00132
LSCCATOX1 →+0.426+0.419.003.00132
LSCCTSPAN17 →+0.830+0.539<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,055 associations by consensus.

BFAR vs ACOX3 — CCRCC

Per-sample scatter of BFAR vs ACOX3 in CCRCC (Pearson r = 0.94).

Explore this scatter interactively →

Exploration