BEND3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BEND3 RNA expression is significantly associated with the protein abundance of many other proteins, with 22,014 significant associations in total. GBM shows the largest number of these associations.

The most reproducible BEND3-associated proteins across cancer lineages are XPO5, NCL_S67, and NOL6. Each is linked with BEND3 in more than 8 cancer types. Because this analysis shows association rather than direction, both BEND3-to-partner and partner-to-BEND3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BEND3 versus XPO5 in BRCA, with a Pearson correlation of 0.49.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (BEND3→partner) and Y-score (partner→BEND3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAXPO5 →+0.546+0.512<.001<.00139
GBMNCL_S67 →+0.817+0.698<.001<.00138
UCECNOL6 →+0.266+0.831<.001<.00138
LSCCNUP93 →+0.260+0.657<.001<.00138
BRCARIF1_S782 →+0.909+0.640<.001<.00138
GBMSMARCA4 →+0.411+0.604<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 22,014 associations by consensus.

BEND3 vs XPO5 — BRCA

Per-sample scatter of BEND3 vs XPO5 in BRCA (Pearson r = 0.49).

Explore this scatter interactively →

Exploration