BEGAIN

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, BEGAIN RNA expression is significantly associated with the go_rna of many other GO terms, with 3,142 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible BEGAIN-associated GO terms across cancer lineages are RNA export from nucleus, Nucleic acid transport, and RNA transport. Each is linked with BEGAIN in more than 9 cancer types. Because this analysis shows association rather than direction, both BEGAIN-to-partner and partner-to-BEGAIN results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (BEGAIN→partner) and Y-score (partner→BEGAIN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSRNA export from nucleus →+0.129+1.724<.001.001310
OESOPHAGUSNucleic acid transport →+0.131+1.839<.001<.00139
OESOPHAGUSRNA transport →+0.131+1.839<.001<.00139
OESOPHAGUSNegative regulation of myoblast fusion →+0.194+2.197<.001.00139
OESOPHAGUSNegative regulation of syncytium formation by plasma membrane fusion →+0.192+2.197<.001.00139
OESOPHAGUSEstablishment of RNA localization →+0.129+1.880<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,142 associations by consensus.

Exploration