BECN1

Across TCGA patient cohorts, BECN1 mutation is significantly associated with the total protein of many other genes, with 44 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible BECN1-associated genes across cancer lineages are EGFR_pY1068, A-Raf_pS299, and ERK2. Each is linked with BECN1 in more than 1 cancer types. Because this analysis shows association rather than direction, both BECN1-to-partner and partner-to-BECN1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EGFR_pY1068 grouped by BECN1-low versus BECN1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BECN1→partner) and Y-score (partner→BECN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	EGFR_pY1068 →	-0.375	-3.807	<.001	<.001	3	1
UCEC	A-Raf_pS299 →	-0.221	-3.321	<.001	.010	3	1
UCEC	ERK2 →	+0.246	+2.321	.004	.033	3	1
UCEC	FoxM1 →	+0.333	+3.807	.004	<.001	3	1
UCEC	FOXO3a_pS318_S321 →	-0.132	-3.160	.019	.019	3	1
UCEC	JNK_pT183_Y185 →	-0.199	-1.986	.008	.032	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 44 associations by consensus.

EGFR_pY1068 by BECN1 expression — UCEC

Explore this box plot interactively →