BEAN1-AS1

Across TCGA pan-cancer cohorts, BEAN1-AS1 RNA differs between tumor and matched normal tissue in 8 of 18 cancer types tested, making tumor–normal expression one of BEAN1-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in uterine corpus endometrial carcinoma (UCEC), where BEAN1-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types BEAN1-AS1 is over-expressed in tumor, although a few such as UCEC and BRCA show the opposite, repressed pattern.

UCEC, BRCA, and THCA are the cancer types where BEAN1-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in BEAN1-AS1 RNA (log₂); positive values indicate higher expression in tumor. p-values are from the differential-expression test.

Lineage	Gender	Stage	Fold-change	p	Sampling consensus
UCEC	All	II,III,IV	−0.407	<.001	6	view →
BRCA	All	All	−0.203	<.001	6	view →
THCA	All	IV	+0.530	.011	5	view →
LUAD	Female	II,III,IV	+0.445	.003	4	view →
LUSC	All	All	−0.118	<.001	4	view →
KIRC	All	All	+0.087	<.001	4	view →
KICH	Female	II,III,IV	+0.141	.006	3	view →
KIRP	All	All	+0.204	.008	2	view →

Pink = over-expressed in tumor, green = repressed in tumor. Showing the 8 strongest of 8 lineages.

BEAN1-AS1–UCEC

Open the UCEC breakdown →