BCAS3

Across TCGA cell cohorts, BCAS3 mutation is significantly associated with the RNA expression of many other genes, with 1,040 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible BCAS3-associated genes across cancer lineages are KRT71, C16orf90, and LILRA1. Each is linked with BCAS3 in more than 1 cancer types. Because this analysis shows association rather than direction, both BCAS3-to-partner and partner-to-BCAS3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KRT71 grouped by BCAS3-low versus BCAS3-high in SOFT_TISSUE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BCAS3→partner) and Y-score (partner→BCAS3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SOFT_TISSUE	KRT71 →	+0.006	+5.369	<.001	.004	3	2
LUNG_NSCLC_LUAD	C16orf90 →	+0.027	+3.188	<.001	.004	3	2
SOFT_TISSUE	LILRA1 →	+0.113	+4.930	<.001	.008	3	1
SOFT_TISSUE	ZAN →	+0.006	+5.369	<.001	.004	3	1
SOFT_TISSUE	DTHD1 →	+0.006	+4.930	<.001	.008	3	1
SOFT_TISSUE	SLC22A6 →	+0.025	+4.930	<.001	.008	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,040 associations by consensus.

KRT71 by BCAS3 expression — SOFT_TISSUE

Explore this box plot interactively →