BCAP29

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BCAP29 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,134 significant associations in total. GBM shows the largest number of these associations.

The most reproducible BCAP29-associated proteins across cancer lineages are SRPK2, NUP155, and PXK. Each is linked with BCAP29 in more than 2 cancer types. Because this analysis shows association rather than direction, both BCAP29-to-partner and partner-to-BCAP29 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BCAP29 versus SRPK2 in GBM, with a Pearson correlation of 0.30.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (BCAP29→partner) and Y-score (partner→BCAP29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMSRPK2 →+0.228+0.223.007.00633
LSCCNUP155 →+0.123+0.238<.001<.00133
GBMPXK →-0.279-0.249.004.00133
GBMTBC1D22A →-0.210-0.187<.001<.00133
LUADCAMSAP2 →+0.222+0.255<.001<.00133
GBMDEF6 →-0.379-0.206.004.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,134 associations by consensus.

BCAP29 vs SRPK2 — GBM

Per-sample scatter of BCAP29 vs SRPK2 in GBM (Pearson r = 0.30).

Explore this scatter interactively →

Exploration