BCAP29

Across TCGA patient cohorts, BCAP29 mutation is significantly associated with the RNA expression of many other genes, with 3,028 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible BCAP29-associated genes across cancer lineages are RN7SL134P, RNU4-27P, and MIR4662B. Each is linked with BCAP29 in more than 1 cancer types. Because this analysis shows association rather than direction, both BCAP29-to-partner and partner-to-BCAP29 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL134P grouped by BCAP29-low versus BCAP29-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BCAP29→partner) and Y-score (partner→BCAP29) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	RN7SL134P →	+0.123	+2.184	<.001	.004	3	2
HNSC	RNU4-27P →	+0.300	+6.339	<.001	.001	3	2
LUSC	MIR4662B →	+0.599	+5.093	<.001	.008	3	2
UCEC	IGHD6-25 →	+0.503	+2.184	.005	.004	3	2
UCEC	TRBV10-2 →	+0.541	+2.684	<.001	<.001	3	2
UCEC	LINC02506 →	+1.044	+2.195	.002	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 3,028 associations by consensus.

RN7SL134P by BCAP29 expression — UCEC

Explore this box plot interactively →