BBS7

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BBS7 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,487 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible BBS7-associated proteins across cancer lineages are GSTCD, GSTK1, and SPCS3. Each is linked with BBS7 in more than 4 cancer types. Because this analysis shows association rather than direction, both BBS7-to-partner and partner-to-BBS7 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BBS7 versus GSTCD in BRCA, with a Pearson correlation of 0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (BBS7→partner) and Y-score (partner→BBS7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAGSTCD →+0.357+0.488<.001<.00135
OVGSTK1 →-0.561-0.533.002<.00135
LSCCSPCS3 →-0.652-0.399<.001<.00135
LSCCRRBP1 →-0.421-0.451<.001<.00135
LSCCSDF2L1 →-0.403-0.445<.001<.00134
LSCCHERPUD1 →-0.647-0.509<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,487 associations by consensus.

BBS7 vs GSTCD — BRCA

Per-sample scatter of BBS7 vs GSTCD in BRCA (Pearson r = 0.34).

Explore this scatter interactively →

Exploration