BATF2

Across TCGA patient cohorts, BATF2 mutation is significantly associated with the RNA expression of many other genes, with 155 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible BATF2-associated genes across cancer lineages are USH2A-AS1, RNU6-752P, and RBPJP2. Each is linked with BATF2 in more than 1 cancer types. Because this analysis shows association rather than direction, both BATF2-to-partner and partner-to-BATF2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, USH2A-AS1 grouped by BATF2-low versus BATF2-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BATF2→partner) and Y-score (partner→BATF2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	USH2A-AS1 →	+0.090	+3.715	<.001	<.001	3	2
SKCM	RNU6-752P →	+0.199	+4.212	<.001	.007	3	2
COAD	RBPJP2 →	+0.021	+4.335	<.001	.005	3	2
LUAD	MTCYBP14 →	+0.020	+4.418	.004	.006	3	2
LUAD	RNU6-273P →	+0.334	+4.786	<.001	.003	3	2
STAD	RNU6-454P →	+0.813	+4.290	<.001	.008	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 155 associations by consensus.

USH2A-AS1 by BATF2 expression — SKCM

Explore this box plot interactively →