BATF

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, BATF mutation is significantly associated with the RNA expression of many other genes, with 1 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible BATF-associated genes across cancer lineages are TMCO5A. Each is linked with BATF in more than 1 cancer types. Because this analysis shows association rather than direction, both BATF-to-partner and partner-to-BATF results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TMCO5A grouped by BATF-low versus BATF-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BATF→partner) and Y-score (partner→BATF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINETMCO5A →+0.026+5.415<.001.00431
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

TMCO5A by BATF expression — LARGE_INTESTINE

Box plot of TMCO5A in BATF-low vs BATF-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration