BANP

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BANP mutation is significantly associated with the RNA expression of many other genes, with 769 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible BANP-associated genes across cancer lineages are LINC02559, RPSAP65, and LINC01707. Each is linked with BANP in more than 2 cancer types. Because this analysis shows association rather than direction, both BANP-to-partner and partner-to-BANP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, LINC02559 grouped by BANP-low versus BANP-high in CESC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BANP→partner) and Y-score (partner→BANP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CESCLINC02559 →+0.674+4.342<.001.00733
COADRPSAP65 →+0.081+3.212<.001.00732
COADLINC01707 →+0.090+3.471.003.00432
BLCAH3Y2 →+0.525+5.320<.001.00132
UCECSKA1 →+0.521+3.480.009.00232
UCECMOCS2 →+0.365+2.748.007.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 769 associations by consensus.

LINC02559 by BANP expression — CESC

Box plot of LINC02559 in BANP-low vs BANP-high samples in CESC.

Explore this box plot interactively →

Exploration