Across TCGA patient cohorts, BAGE2 mutation is significantly associated with the immune_cell of many other genes, with 4 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible BAGE2-associated genes across cancer lineages are Endothelial cells, Skeletal muscle, and Th1 cells. Each is linked with BAGE2 in more than 1 cancer types. Because this analysis shows association rather than direction, both BAGE2-to-partner and partner-to-BAGE2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BAGE2→partner) and Y-score (partner→BAGE2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	Endothelial cells →	-0.046	-3.255	.010	.010	3	1
SKCM	Skeletal muscle →	+0.042	+2.591	.014	.006	3	1
SKCM	Th1 cells →	-0.096	-3.312	.017	.010	3	1
SKCM	mv Endothelial cells →	-0.030	-2.578	.016	.011	1	1

Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

Exploration

BAGE2 survival (RNA) · tumor vs normal (RNA) · all BAGE2 data types