BABAM2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BABAM2 protein abundance is significantly associated with the RNA expression of many other genes, with 5,087 significant associations in total. GBM shows the largest number of these associations.

The most reproducible BABAM2-associated genes across cancer lineages are SNAI2, FCHO1, and SAE1. Each is linked with BABAM2 in more than 3 cancer types. Because this analysis shows association rather than direction, both BABAM2-to-partner and partner-to-BABAM2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BABAM2 versus SNAI2 in UCEC, with a Pearson correlation of -0.30.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BABAM2→partner) and Y-score (partner→BABAM2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSNAI2 →-0.803-0.116.001.00234
GBMFCHO1 →+0.514+0.105<.001.00833
GBMSAE1 →-0.383-0.139.004.00633
OVMEDAG →-1.007-0.152.003.00633
OVSULF1 →-1.253-0.153.001.00633
OVITGB1 →-0.597-0.217.004.00433
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,087 associations by consensus.

BABAM2 vs SNAI2 — UCEC

Per-sample scatter of BABAM2 vs SNAI2 in UCEC (Pearson r = -0.30).

Explore this scatter interactively →

Exploration