B4GALT6

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, B4GALT6 mutation is significantly associated with the RNA expression of many other genes, with 3,207 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible B4GALT6-associated genes across cancer lineages are CCL5, RNA5SP414, and CCL4. Each is linked with B4GALT6 in more than 1 cancer types. Because this analysis shows association rather than direction, both B4GALT6-to-partner and partner-to-B4GALT6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CCL5 grouped by B4GALT6-low versus B4GALT6-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (B4GALT6→partner) and Y-score (partner→B4GALT6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCCL5 →+0.960+3.906.001<.00132
UCECRNA5SP414 →+0.430+2.255<.001<.00132
UCECCCL4 →+0.727+2.021.001<.00132
UCECRNA5SP412 →+0.527+1.967<.001<.00132
UCECSRCIN1 →-0.632-2.896<.001.00132
UCECALDOA →+0.379+1.716.008.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,207 associations by consensus.

CCL5 by B4GALT6 expression — UCEC

Box plot of CCL5 in B4GALT6-low vs B4GALT6-high samples in UCEC.

Explore this box plot interactively →

Exploration