B4GALT2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, B4GALT2 protein abundance is significantly associated with the RNA expression of many other genes, with 4,465 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible B4GALT2-associated genes across cancer lineages are SLC4A9, RALGPS1, and RMND5A. Each is linked with B4GALT2 in more than 1 cancer types. Because this analysis shows association rather than direction, both B4GALT2-to-partner and partner-to-B4GALT2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, B4GALT2 versus SLC4A9 in GBM, with a Pearson correlation of -0.68.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (B4GALT2→partner) and Y-score (partner→B4GALT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMSLC4A9 →-0.618-1.070.006.00132
GBMRALGPS1 →-0.906-1.203.001<.00132
HNSCRMND5A →-0.725-0.729<.001.00132
HNSCLRP6 →-1.053-0.842.001<.00132
GBMCPNE6 →-1.463-1.186.001<.00131
GBMDCAF11 →-0.326-0.891.005.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,465 associations by consensus.

B4GALT2 vs SLC4A9 — GBM

Per-sample scatter of B4GALT2 vs SLC4A9 in GBM (Pearson r = -0.68).

Explore this scatter interactively →

Exploration