B3GNTL1

Across TCGA patient cohorts, B3GNTL1 protein abundance is significantly associated with the RNA expression of many other genes, with 2,795 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible B3GNTL1-associated genes across cancer lineages are H3-3B, CLIP1, and INTU. Each is linked with B3GNTL1 in more than 2 cancer types. Because this analysis shows association rather than direction, both B3GNTL1-to-partner and partner-to-B3GNTL1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, B3GNTL1 versus H3-3B in PDAC, with a Pearson correlation of 0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (B3GNTL1→partner) and Y-score (partner→B3GNTL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PDAC	H3-3B →	+0.457	+0.416	.005	.001	3	3
HNSC	CLIP1 →	-0.441	-0.466	.006	.003	3	2
HNSC	INTU →	+0.662	+0.602	.002	<.001	3	2
HNSC	BCAM →	+1.509	+0.791	.001	<.001	3	2
BRCA	PCYOX1 →	+0.561	+0.508	<.001	<.001	3	2
BRCA	ARMC9 →	+0.455	+0.543	.004	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,795 associations by consensus.

B3GNTL1 vs H3-3B — PDAC

Explore this scatter interactively →