Across TCGA cell cohorts, B3GNT6 mutation is significantly associated with the RNA expression of many other genes, with 8 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible B3GNT6-associated genes across cancer lineages are PROP1, NEUROG1, and PRAMEF9. Each is linked with B3GNT6 in more than 1 cancer types. Because this analysis shows association rather than direction, both B3GNT6-to-partner and partner-to-B3GNT6 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (B3GNT6→partner) and Y-score (partner→B3GNT6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	PROP1 →	+0.039	+4.054	<.001	.004	3	2
PANCREAS	NEUROG1 →	+0.032	+4.614	<.001	.004	3	1
LUNG_NSCLC_LUAD	PRAMEF9 →	+0.012	+5.228	<.001	.005	3	1
OVARY	OR2M4 →	+0.076	+4.700	<.001	.002	3	1
OVARY	OR13C2 →	+0.046	+4.228	.009	.006	3	1
LARGE_INTESTINE	ACER1 →	+0.083	+3.823	.007	.006	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

Exploration

B3GNT6 survival (RNA) · tumor vs normal (RNA) · all B3GNT6 data types