B3GNT2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, B3GNT2 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,767 significant associations in total. GBM shows the largest number of these associations.

The most reproducible B3GNT2-associated proteins across cancer lineages are CUEDC1, CYP2S1, and MSN_S440. Each is linked with B3GNT2 in more than 3 cancer types. Because this analysis shows association rather than direction, both B3GNT2-to-partner and partner-to-B3GNT2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, B3GNT2 versus CUEDC1 in BRCA, with a Pearson correlation of 0.30.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (B3GNT2→partner) and Y-score (partner→B3GNT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACUEDC1 →+0.392+0.649<.001<.00134
OVCYP2S1 →+0.658+0.515.001.00134
GBMMSN_S440 →+0.474+0.574.002<.00134
PDACDAPK3 →+0.347+0.287<.001.00134
BRCABICRAL_S934 →-0.459-0.382.005.00333
GBMPLEKHG1 →+0.292+0.409.001.00533
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,767 associations by consensus.

B3GNT2 vs CUEDC1 — BRCA

Per-sample scatter of B3GNT2 vs CUEDC1 in BRCA (Pearson r = 0.30).

Explore this scatter interactively →

Exploration