B3GNT2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, B3GNT2 protein abundance is significantly associated with the RNA expression of many other genes, with 2,387 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible B3GNT2-associated genes across cancer lineages are RASAL3, GLIS2, and ANGPTL6. Each is linked with B3GNT2 in more than 2 cancer types. Because this analysis shows association rather than direction, both B3GNT2-to-partner and partner-to-B3GNT2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, B3GNT2 versus RASAL3 in OV, with a Pearson correlation of -0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (B3GNT2→partner) and Y-score (partner→B3GNT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVRASAL3 →-0.784-0.331.001.00333
OVGLIS2 →-1.235-0.448.005.00233
OVANGPTL6 →-0.381-0.343.001.00133
HNSCZC3H12D →-0.575-0.458<.001<.00133
HNSCJAK3 →-0.957-0.486<.001<.00132
OVAKNA →-0.800-0.482.003<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,387 associations by consensus.

B3GNT2 vs RASAL3 — OV

Per-sample scatter of B3GNT2 vs RASAL3 in OV (Pearson r = -0.33).

Explore this scatter interactively →

Exploration