B3GNT2

Across TCGA cell cohorts, B3GNT2 mutation is significantly associated with the RNA expression of many other genes, with 4 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible B3GNT2-associated genes across cancer lineages are ACER1, SLC4A1, and CFHR2. Each is linked with B3GNT2 in more than 1 cancer types. Because this analysis shows association rather than direction, both B3GNT2-to-partner and partner-to-B3GNT2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ACER1 grouped by B3GNT2-low versus B3GNT2-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (B3GNT2→partner) and Y-score (partner→B3GNT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	ACER1 →	+0.087	+3.823	.002	.006	3	1
LARGE_INTESTINE	SLC4A1 →	+0.032	+3.658	.009	.005	3	1
LARGE_INTESTINE	CFHR2 →	+0.038	+4.022	<.001	.006	3	1
LARGE_INTESTINE	BEND4 →	+0.300	+3.807	<.001	.006	2	1

Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

ACER1 by B3GNT2 expression — LARGE_INTESTINE

Explore this box plot interactively →