B3GALNT2

Across TCGA patient cohorts, B3GALNT2 protein abundance is significantly associated with the RNA expression of many other genes, with 872 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible B3GALNT2-associated genes across cancer lineages are LONRF3, MTHFD1, and NCALD. Each is linked with B3GALNT2 in more than 1 cancer types. Because this analysis shows association rather than direction, both B3GALNT2-to-partner and partner-to-B3GALNT2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, B3GALNT2 versus LONRF3 in HNSC, with a Pearson correlation of -0.82.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (B3GALNT2→partner) and Y-score (partner→B3GALNT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	LONRF3 →	-1.714	-0.685	<.001	.003	3	2
HNSC	MTHFD1 →	+1.290	+0.685	<.001	.003	3	1
HNSC	NCALD →	-2.300	-0.685	.006	.003	3	1
HNSC	DCTN6 →	+1.105	+0.685	.003	.003	3	1
HNSC	THEG →	-2.090	-0.605	.002	.006	3	1
HNSC	PLGRKT →	+0.984	+0.685	.009	.003	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 872 associations by consensus.

B3GALNT2 vs LONRF3 — HNSC

Explore this scatter interactively →