AVL9

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AVL9 RNA expression is significantly associated with the protein abundance of many other proteins, with 15,632 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible AVL9-associated proteins across cancer lineages are NUDCD3, PURB, and FOXK1. Each is linked with AVL9 in more than 8 cancer types. Because this analysis shows association rather than direction, both AVL9-to-partner and partner-to-AVL9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, AVL9 versus NUDCD3 in GBM, with a Pearson correlation of 0.27.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (AVL9→partner) and Y-score (partner→AVL9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMNUDCD3 →+0.331+0.276<.001<.00139
CCRCCPURB →+0.299+0.353<.001<.00137
LSCCFOXK1 →+0.322+0.311<.001<.00137
COADFOXK1_S213 →+0.427+0.354<.001<.00137
LUADBZW2 →+0.398+0.549<.001<.00136
HNSCMEPCE →+0.387+0.608<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,632 associations by consensus.

AVL9 vs NUDCD3 — GBM

Per-sample scatter of AVL9 vs NUDCD3 in GBM (Pearson r = 0.27).

Explore this scatter interactively →

Exploration