ATPAF1

Across TCGA patient cohorts, ATPAF1 RNA expression is significantly associated with the protein abundance of many other proteins, with 18,549 significant associations in total. GBM shows the largest number of these associations.

The most reproducible ATPAF1-associated proteins across cancer lineages are HOOK1, TCEA3, and PTPRF. Each is linked with ATPAF1 in more than 5 cancer types. Because this analysis shows association rather than direction, both ATPAF1-to-partner and partner-to-ATPAF1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ATPAF1 versus HOOK1 in GBM, with a Pearson correlation of 0.28.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (ATPAF1→partner) and Y-score (partner→ATPAF1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	HOOK1 →	+0.544	+0.304	.005	.001	3	6
LSCC	TCEA3 →	+0.744	+0.456	<.001	<.001	3	5
LSCC	PTPRF →	+0.504	+0.417	<.001	<.001	3	5
OV	CARS1 →	-0.334	-0.575	<.001	<.001	3	5
GBM	CDC42EP5 →	-0.465	-0.373	.001	<.001	3	5
OV	LRCH1 →	-0.306	-0.769	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 18,549 associations by consensus.

ATPAF1 vs HOOK1 — GBM

Explore this scatter interactively →