ATP5PDP3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ATP5PDP3 RNA expression is significantly associated with the protein abundance of many other proteins, with 3,275 significant associations in total. GBM shows the largest number of these associations.

The most reproducible ATP5PDP3-associated proteins across cancer lineages are NFIB, CACYBP, and DDX42. Each is linked with ATP5PDP3 in more than 4 cancer types. Because this analysis shows association rather than direction, both ATP5PDP3-to-partner and partner-to-ATP5PDP3 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (ATP5PDP3→partner) and Y-score (partner→ATP5PDP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMNFIB →+0.474+0.403<.001<.00135
COADCACYBP →+0.302+0.119.005.00332
COADDDX42 →+0.163+0.142<.001.00332
GBMENDOD1 →-0.398-0.469<.001.00132
CCRCCPHF2_S905 →+0.507+0.270.002.00232
OVPIP5K1C_S476 →-0.594-0.252.002.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,275 associations by consensus.

Exploration