ATP2B2-IT1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ATP2B2-IT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 5,128 significant associations in total. GBM shows the largest number of these associations.

The most reproducible ATP2B2-IT1-associated proteins across cancer lineages are APC_S2794, MGAT1, and MMS19. Each is linked with ATP2B2-IT1 in more than 1 cancer types. Because this analysis shows association rather than direction, both ATP2B2-IT1-to-partner and partner-to-ATP2B2-IT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ATP2B2-IT1 versus APC_S2794 in GBM, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (ATP2B2-IT1→partner) and Y-score (partner→ATP2B2-IT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMAPC_S2794 →+0.680+0.653<.001<.00132
CCRCCMGAT1 →-0.342-0.408<.001<.00132
CCRCCMMS19 →-0.185-0.464.005.00232
CCRCCMYRIP_S534 →+0.792+0.493<.001<.00132
CCRCCNADK_S46 →-0.487-0.462<.001<.00132
GBMNMI →-0.317-0.630.006<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,128 associations by consensus.

ATP2B2-IT1 vs APC_S2794 — GBM

Per-sample scatter of ATP2B2-IT1 vs APC_S2794 in GBM (Pearson r = 0.40).

Explore this scatter interactively →

Exploration