ATP13A2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ATP13A2 mutation is significantly associated with the total protein of many other genes, with 41 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ATP13A2-associated genes across cancer lineages are ATM, 4E-BP1_pT70, and Notch1. Each is linked with ATP13A2 in more than 3 cancer types. Because this analysis shows association rather than direction, both ATP13A2-to-partner and partner-to-ATP13A2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ATM grouped by ATP13A2-low versus ATP13A2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ATP13A2→partner) and Y-score (partner→ATP13A2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECATM →-0.471-2.794.002.00234
COAD4E-BP1_pT70 →+0.170+2.815.009.03633
UCECNotch1 →+0.194+2.424<.001.00133
STADmTOR_pS2448 →-0.275-3.169<.001.01914
STADc-Jun_pS73 →-0.214-3.000.018.03432
UCECCyclin-B1 →+0.637+3.906.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 41 associations by consensus.

ATM by ATP13A2 expression — UCEC

Box plot of ATM in ATP13A2-low vs ATP13A2-high samples in UCEC.

Explore this box plot interactively →

Exploration