Across TCGA patient cohorts, ATL3 mutation is significantly associated with the RNA expression of many other genes, with 1,644 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ATL3-associated genes across cancer lineages are CST12P, RNU6-927P, and MIR3118-3. Each is linked with ATL3 in more than 1 cancer types. Because this analysis shows association rather than direction, both ATL3-to-partner and partner-to-ATL3 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ATL3→partner) and Y-score (partner→ATL3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	CST12P →	+0.206	+5.736	<.001	.003	3	2
BLCA	RNU6-927P →	+0.520	+5.106	<.001	.008	3	2
BRCA	MIR3118-3 →	+0.558	+8.471	<.001	.005	3	1
HNSC	NF1P5 →	+0.272	+5.822	<.001	.003	3	1
HNSC	OR14C36 →	+0.211	+6.339	<.001	.001	3	1
HNSC	SCGB1D4 →	+0.318	+5.435	<.001	.005	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,644 associations by consensus.

Exploration

ATL3 survival (RNA) · tumor vs normal (RNA) · all ATL3 data types