ATL2

Across TCGA patient cohorts, ATL2 protein abundance is significantly associated with the RNA expression of many other genes, with 16,162 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible ATL2-associated genes across cancer lineages are CPED1, SCML4, and RASGRP2. Each is linked with ATL2 in more than 6 cancer types. Because this analysis shows association rather than direction, both ATL2-to-partner and partner-to-ATL2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ATL2 versus CPED1 in LSCC, with a Pearson correlation of -0.41.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ATL2→partner) and Y-score (partner→ATL2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	CPED1 →	-0.899	-0.466	<.001	<.001	3	7
HNSC	SCML4 →	-0.866	-0.388	<.001	<.001	3	6
LSCC	RASGRP2 →	-0.788	-0.392	<.001	<.001	3	6
HNSC	CD40LG →	-0.769	-0.475	<.001	<.001	3	5
OV	CD37 →	-0.994	-0.422	<.001	<.001	3	5
OV	CARD8 →	-0.596	-0.412	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,162 associations by consensus.

ATL2 vs CPED1 — LSCC

Explore this scatter interactively →