ATIC

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ATIC mutation is significantly associated with the RNA expression of many other genes, with 893 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ATIC-associated genes across cancer lineages are RN7SL134P, SALRNA3, and ELOCP24. Each is linked with ATIC in more than 2 cancer types. Because this analysis shows association rather than direction, both ATIC-to-partner and partner-to-ATIC results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL134P grouped by ATIC-low versus ATIC-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ATIC→partner) and Y-score (partner→ATIC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRN7SL134P →+0.099+1.862.001.00933
HNSCSALRNA3 →+0.053+4.226.007.00132
BLCAELOCP24 →+0.558+3.692.002.00732
BLCAKATNBL1P4 →+0.062+4.603<.001<.00132
UCECTBRG1 →+0.269+1.939.007.00932
COADMRM3 →+0.630+3.200<.001.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 893 associations by consensus.

RN7SL134P by ATIC expression — UCEC

Box plot of RN7SL134P in ATIC-low vs ATIC-high samples in UCEC.

Explore this box plot interactively →

Exploration