ASTL

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ASTL mutation is significantly associated with the RNA expression of many other genes, with 303 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ASTL-associated genes across cancer lineages are AWAT2, MMP27, and SYCN. Each is linked with ASTL in more than 1 cancer types. Because this analysis shows association rather than direction, both ASTL-to-partner and partner-to-ASTL results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ASTL→partner) and Y-score (partner→ASTL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaAWAT2 →+0.015+4.705<.001.00332
BLOOD_LeukemiaMMP27 →+0.019+4.969<.001.00331
BLOOD_LeukemiaSYCN →+0.037+4.539<.001.00731
BLOOD_LeukemiaTMEM95 →+0.028+5.269<.001<.00131
BLOOD_LeukemiaKRTAP12-3 →+0.061+4.539<.001.00731
LARGE_INTESTINEGCAT →+1.330+3.212.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 303 associations by consensus.

Exploration