ASF1B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ASF1B mutation is significantly associated with the RNA expression of many other genes, with 663 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ASF1B-associated genes across cancer lineages are SNORD116-5, MIR4695, and MIR3941. Each is linked with ASF1B in more than 1 cancer types. Because this analysis shows association rather than direction, both ASF1B-to-partner and partner-to-ASF1B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SNORD116-5 grouped by ASF1B-low versus ASF1B-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ASF1B→partner) and Y-score (partner→ASF1B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMSNORD116-5 →+0.291+4.282<.001.00932
LUADMIR4695 →+0.423+7.930<.001.00832
UCECMIR3941 →+0.519+2.061.001.00832
BLCAMIR182 →+0.439+5.251<.001.00632
UCECCOX6B1P3 →+0.481+3.090.001<.00132
SKCMOR4X2 →+0.034+5.039<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 663 associations by consensus.

SNORD116-5 by ASF1B expression — SKCM

Box plot of SNORD116-5 in ASF1B-low vs ASF1B-high samples in SKCM.

Explore this box plot interactively →

Exploration