ARSL

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ARSL mutation is significantly associated with the RNA expression of many other genes, with 15 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible ARSL-associated genes across cancer lineages are SLC1A6, ARSH, and OR6J1. Each is linked with ARSL in more than 1 cancer types. Because this analysis shows association rather than direction, both ARSL-to-partner and partner-to-ARSL results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SLC1A6 grouped by ARSL-low versus ARSL-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARSL→partner) and Y-score (partner→ARSL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaSLC1A6 →+0.042+5.070<.001.00131
BLOOD_LymphomaARSH →+0.035+4.452<.001.00131
BLOOD_LymphomaOR6J1 →+0.003+4.058<.001.00931
LUNG_NSCLC_LUADCSN2 →+0.019+5.228<.001.00531
LUNG_NSCLC_LUADMEIKIN →+0.089+4.887.001.00931
LUNG_NSCLC_LUADC1orf232 →+0.030+4.887.002.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

SLC1A6 by ARSL expression — BLOOD_Lymphoma

Box plot of SLC1A6 in ARSL-low vs ARSL-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration