ARSH

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ARSH mutation is significantly associated with the RNA expression of many other genes, with 1,466 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ARSH-associated genes across cancer lineages are ZNF77, RN7SL690P, and DTWD1. Each is linked with ARSH in more than 2 cancer types. Because this analysis shows association rather than direction, both ARSH-to-partner and partner-to-ARSH results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARSH→partner) and Y-score (partner→ARSH) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMZNF77 →+0.531+3.832<.001<.00133
SKCMRN7SL690P →+0.049+2.449<.001.00732
SKCMDTWD1 →+0.368+2.328.008<.00132
SKCMEIF3J →+0.515+2.826.007.00132
UCECFARSB →+0.359+3.470.002.00232
SKCMEPHX2 →-0.810-1.894.005.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,466 associations by consensus.

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