ARSH

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ARSH RNA expression is significantly associated with the go_rna of many other GO terms, with 1,097 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible ARSH-associated GO terms across cancer lineages are Action potential propagation, Serotonin secretion, and Serotonin production involved in inflammatory response. Each is linked with ARSH in more than 6 cancer types. Because this analysis shows association rather than direction, both ARSH-to-partner and partner-to-ARSH results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (ARSH→partner) and Y-score (partner→ARSH) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
URINARY_TRACTAction potential propagation →-0.989-0.047.001.00836
STOMACHSerotonin secretion →+1.506+0.123<.001.00736
STOMACHSerotonin production involved in inflammatory response →+1.506+0.123<.001.00736
STOMACHSerotonin secretion involved in inflammatory response →+1.506+0.123<.001.00736
OVARYPigment metabolic process involved in pigmentation →-0.234-0.099<.001.00236
LUNG_NSCLC_LUADIntracellular transport of virus →-0.138-0.217<.001.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,097 associations by consensus.

Exploration