ARSB

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ARSB mutation is significantly associated with the RNA expression of many other genes, with 3,385 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ARSB-associated genes across cancer lineages are RNU6ATAC7P, ATP5F1A, and HAUS1. Each is linked with ARSB in more than 2 cancer types. Because this analysis shows association rather than direction, both ARSB-to-partner and partner-to-ARSB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6ATAC7P grouped by ARSB-low versus ARSB-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARSB→partner) and Y-score (partner→ARSB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMRNU6ATAC7P →+0.305+4.508<.001.00133
UCECATP5F1A →+0.449+3.000.002.00132
UCECHAUS1 →+0.454+2.606.008.00532
UCECPDK1 →+0.572+2.016.001.00532
UCECSKA1 →+0.736+1.936<.001.00332
UCECCCNB2 →+0.753+3.023<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,385 associations by consensus.

RNU6ATAC7P by ARSB expression — SKCM

Box plot of RNU6ATAC7P in ARSB-low vs ARSB-high samples in SKCM.

Explore this box plot interactively →

Exploration