ARNTL2

Across TCGA cell cohorts, ARNTL2 RNA expression is significantly associated with the RNA expression of many other genes, with 12,318 significant associations in total. BONE shows the largest number of these associations.

The most reproducible ARNTL2-associated genes across cancer lineages are SMCO2, FOSL1, and MYH9. Each is linked with ARNTL2 in more than 16 cancer types. Because this analysis shows association rather than direction, both ARNTL2-to-partner and partner-to-ARNTL2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ARNTL2 versus SMCO2 in LUNG_NSCLC_LUSC, with a Pearson correlation of 0.65.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARNTL2→partner) and Y-score (partner→ARNTL2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUSC	SMCO2 →	+0.771	+2.266	<.001	<.001	3	17
BONE	FOSL1 →	+4.251	+1.753	<.001	<.001	3	15
BONE	MYH9 →	+2.160	+1.646	<.001	<.001	3	13
STOMACH	MED21 →	+1.050	+1.274	<.001	<.001	2	14
BLOOD_Myeloma	MSANTD3 →	+1.197	+2.301	<.001	<.001	3	12
BLOOD_Lymphoma	CD274 →	+2.582	+1.980	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,318 associations by consensus.

ARNTL2 vs SMCO2 — LUNG_NSCLC_LUSC

Explore this scatter interactively →