ARNT2

Across TCGA patient cohorts, ARNT2 protein abundance is significantly associated with the RNA expression of many other genes, with 8,576 significant associations in total. GBM shows the largest number of these associations.

The most reproducible ARNT2-associated genes across cancer lineages are SLC39A6, ZNF429, and HLA-DPB2. Each is linked with ARNT2 in more than 2 cancer types. Because this analysis shows association rather than direction, both ARNT2-to-partner and partner-to-ARNT2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ARNT2 versus SLC39A6 in BRCA, with a Pearson correlation of 0.34.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARNT2→partner) and Y-score (partner→ARNT2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	SLC39A6 →	+1.202	+0.443	.003	.002	3	3
BRCA	ZNF429 →	+0.808	+0.716	<.001	.001	3	3
CCRCC	HLA-DPB2 →	-1.103	-1.093	.006	.005	3	3
GBM	LINC01146 →	-0.601	-0.257	<.001	<.001	3	3
BRCA	SLC39A9 →	+0.521	+0.601	.001	.001	3	3
BRCA	PCM1 →	+0.652	+0.580	<.001	.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,576 associations by consensus.

ARNT2 vs SLC39A6 — BRCA

Explore this scatter interactively →