ARHGEF17

mass-spec protein — tumor vs normal
Tumor vs Normalmass-specBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, ARHGEF17 mass-spec protein differs between tumor and matched normal tissue in 7 of 18 cancer types tested, making tumor–normal expression one of ARHGEF17’s most consistent transcriptional readouts.

The strongest signal is observed in lung squamous cell carcinoma (LSCC), where ARHGEF17 mass-spec protein is repressed in tumor relative to normal tissue. In most cancer types ARHGEF17 is over-expressed in tumor, although a few such as LSCC and COAD show the opposite, repressed pattern.

LSCC, COAD, and LUAD are the cancer types where ARHGEF17 tumor–normal differential expression is most reproducible.

mass-spec protein tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in ARHGEF17 mass-spec protein (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LSCCMaleII,III,IV−0.909<.0019view →
COADMaleIII,IV−0.669<.0019view →
LUADFemaleIII,IV−0.652<.0019view →
CCRCCMaleAll+0.287<.0017view →
PDACAllAll+0.277<.0016view →
HNSCAllAll−0.155<.0016view →
OVAllAll−0.618<.0012view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 7 strongest of 7 lineages.

ARHGEF17–LSCC

Tumor-vs-normal mass-spec protein box plot for ARHGEF17 in LSCC.

Open the LSCC breakdown →

Exploration