ARHGAP6

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ARHGAP6 protein abundance is significantly associated with the RNA expression of many other genes, with 16,260 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible ARHGAP6-associated genes across cancer lineages are CPED1, CENPF, and CNRIP1. Each is linked with ARHGAP6 in more than 6 cancer types. Because this analysis shows association rather than direction, both ARHGAP6-to-partner and partner-to-ARHGAP6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ARHGAP6 versus CPED1 in UCEC, with a Pearson correlation of 0.51.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARHGAP6→partner) and Y-score (partner→ARHGAP6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCPED1 →+1.076+0.473<.001<.00137
LSCCCENPF →-0.998-0.392<.001<.00137
UCECCNRIP1 →+1.027+0.708<.001<.00137
BRCAKLF2 →+0.989+0.447<.001<.00137
UCECRAMP2 →+0.884+0.576<.001<.00137
CCRCCEDNRB →+1.183+0.261<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 16,260 associations by consensus.

ARHGAP6 vs CPED1 — UCEC

Per-sample scatter of ARHGAP6 vs CPED1 in UCEC (Pearson r = 0.51).

Explore this scatter interactively →

Exploration