ARHGAP39

Across TCGA patient cohorts, ARHGAP39 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,156 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible ARHGAP39-associated proteins across cancer lineages are ARHGAP39_S366, GTF3C2, and RUVBL2. Each is linked with ARHGAP39 in more than 6 cancer types. Because this analysis shows association rather than direction, both ARHGAP39-to-partner and partner-to-ARHGAP39 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ARHGAP39 versus ARHGAP39_S366 in UCEC, with a Pearson correlation of 0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (ARHGAP39→partner) and Y-score (partner→ARHGAP39) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	ARHGAP39_S366 →	+0.858	+0.795	<.001	.001	3	7
LSCC	GTF3C2 →	+0.251	+0.684	.006	.001	3	6
LSCC	RUVBL2 →	+0.287	+0.705	<.001	<.001	3	5
LUAD	PRKDC →	+0.256	+0.803	<.001	<.001	3	5
GBM	PSMB10 →	-0.514	-0.583	<.001	.001	3	5
HNSC	PUF60 →	+0.288	+0.634	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,156 associations by consensus.

ARHGAP39 vs ARHGAP39_S366 — UCEC

Explore this scatter interactively →