ARHGAP35

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ARHGAP35 mutation is significantly associated with the RNA expression of many other genes, with 3,235 significant associations in total. COAD shows the largest number of these associations.

The most reproducible ARHGAP35-associated genes across cancer lineages are ITGAE, MIR3125, and MRPS11. Each is linked with ARHGAP35 in more than 3 cancer types. Because this analysis shows association rather than direction, both ARHGAP35-to-partner and partner-to-ARHGAP35 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ITGAE grouped by ARHGAP35-low versus ARHGAP35-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARHGAP35→partner) and Y-score (partner→ARHGAP35) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADITGAE →+0.378+3.026.003<.00134
BLCAMIR3125 →+0.877+2.144<.001.00334
UCECMRPS11 →+0.181+0.955.006.00133
UCECNOP10 →+0.214+1.265.004.00533
UCECPTP4A3 →-0.451-1.677<.001<.00133
COADCDCA2 →+0.877+3.013<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,235 associations by consensus.

ITGAE by ARHGAP35 expression — COAD

Box plot of ITGAE in ARHGAP35-low vs ARHGAP35-high samples in COAD.

Explore this box plot interactively →

Exploration