ARHGAP28

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ARHGAP28 mutation is significantly associated with the total protein of many other genes, with 63 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ARHGAP28-associated genes across cancer lineages are Caspase-7-cleavedD198, Cyclin-B1, and Cyclin-E1. Each is linked with ARHGAP28 in more than 2 cancer types. Because this analysis shows association rather than direction, both ARHGAP28-to-partner and partner-to-ARHGAP28 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by ARHGAP28-low versus ARHGAP28-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARHGAP28→partner) and Y-score (partner→ARHGAP28) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADCaspase-7-cleavedD198 →+1.304+3.016<.001.01833
UCECCyclin-B1 →+0.774+3.807<.001<.00133
COADCyclin-E1 →+0.290+2.330.010.02033
SKCM4E-BP1 →+0.267+2.584.037.01033
UCECEGFR_pY1068 →-0.359-3.459<.001<.00132
UCECFoxM1 →+0.248+2.321.007.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 63 associations by consensus.

Caspase-7-cleavedD198 by ARHGAP28 expression — COAD

Box plot of Caspase-7-cleavedD198 in ARHGAP28-low vs ARHGAP28-high samples in COAD.

Explore this box plot interactively →

Exploration