ARHGAP17

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ARHGAP17 mutation is significantly associated with the RNA expression of many other genes, with 642 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ARHGAP17-associated genes across cancer lineages are FAM205A, DPH2, and DBT. Each is linked with ARHGAP17 in more than 1 cancer types. Because this analysis shows association rather than direction, both ARHGAP17-to-partner and partner-to-ARHGAP17 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FAM205A grouped by ARHGAP17-low versus ARHGAP17-high in BLOOD_Myeloma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARHGAP17→partner) and Y-score (partner→ARHGAP17) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_MyelomaFAM205A →+0.024+3.977<.001.00632
LARGE_INTESTINEDPH2 →+0.541+3.257<.001.00232
LARGE_INTESTINEDBT →+0.623+3.389.001.00132
LARGE_INTESTINEAMIGO1 →+0.598+3.628.007<.00132
LARGE_INTESTINEGET3 →+0.417+2.502.005.00532
BLOOD_MyelomaTAS2R1 →+0.056+3.716.003.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 642 associations by consensus.

FAM205A by ARHGAP17 expression — BLOOD_Myeloma

Box plot of FAM205A in ARHGAP17-low vs ARHGAP17-high samples in BLOOD_Myeloma.

Explore this box plot interactively →

Exploration