ARF5

Across TCGA patient cohorts, ARF5 mutation is significantly associated with the total protein of many other genes, with 10 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ARF5-associated genes across cancer lineages are EGFR_pY1068, MSH6, and PI3K-p85. Each is linked with ARF5 in more than 1 cancer types. Because this analysis shows association rather than direction, both ARF5-to-partner and partner-to-ARF5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EGFR_pY1068 grouped by ARF5-low versus ARF5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARF5→partner) and Y-score (partner→ARF5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	EGFR_pY1068 →	-0.273	-3.321	.038	.010	3	1
UCEC	MSH6 →	-0.673	-3.321	<.001	.010	3	1
UCEC	PI3K-p85 →	+0.304	+3.009	.005	.019	3	1
UCEC	Src_pY416 →	-0.250	-3.308	.048	.010	3	1
UCEC	Syk →	+0.521	+3.335	.007	.005	3	1
UCEC	Bax →	+0.315	+3.321	.012	.010	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

EGFR_pY1068 by ARF5 expression — UCEC

Explore this box plot interactively →