ARF3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ARF3 mutation is significantly associated with the total protein of many other genes, with 8 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ARF3-associated genes across cancer lineages are Heregulin, MEK1, and Tuberin_pT1462. Each is linked with ARF3 in more than 1 cancer types. Because this analysis shows association rather than direction, both ARF3-to-partner and partner-to-ARF3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Heregulin grouped by ARF3-low versus ARF3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARF3→partner) and Y-score (partner→ARF3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECHeregulin →-0.161-3.321.013.01031
UCECMEK1 →+0.396+2.999.038.03531
UCECTuberin_pT1462 →+0.377+2.179.001.03431
UCECBid →-0.173-3.000.005.03631
UCECTuberin →+0.427+2.817.002.03621
UCECp62 Lck ligand →+0.475+3.321.005.01011
Each partner links to its Q-omics profile. Showing the 6 strongest of 8 associations by consensus.

Heregulin by ARF3 expression — UCEC

Box plot of Heregulin in ARF3-low vs ARF3-high samples in UCEC.

Explore this box plot interactively →

Exploration