ARC

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ARC mutation is significantly associated with the total protein of many other genes, with 26 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ARC-associated genes across cancer lineages are PCNA, TFRC, and ASNS. Each is linked with ARC in more than 1 cancer types. Because this analysis shows association rather than direction, both ARC-to-partner and partner-to-ARC results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ARC→partner) and Y-score (partner→ARC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPCNA →+0.344+2.459<.001.02032
UCECTFRC →+0.671+3.000.008.03632
COADASNS →+0.708+2.815.001.03632
UCECINPP4B →-0.487-3.571.001.00231
UCECMEK1 →+0.532+3.584.002.00222
UCECmTOR_pS2448 →-0.170-3.150.018.01931
Each partner links to its Q-omics profile. Showing the 6 strongest of 26 associations by consensus.

Exploration