ARC

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ARC RNA expression is significantly associated with the go_rna of many other GO terms, with 3,291 significant associations in total. BONE shows the largest number of these associations.

The most reproducible ARC-associated GO terms across cancer lineages are Nucleic acid catabolic process, Protein-RNA complex organization, and Regulation of ubiquitin-dependent protein catabolic process. Each is linked with ARC in more than 8 cancer types. Because this analysis shows association rather than direction, both ARC-to-partner and partner-to-ARC results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (ARC→partner) and Y-score (partner→ARC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONENucleic acid catabolic process →+0.052+1.671<.001<.00139
BONEProtein-RNA complex organization →+0.082+1.886<.001<.00137
UPPER_AERODIGESTIVE_TRACTRegulation of ubiquitin-dependent protein catabolic process →+0.058+0.444<.001.00728
BLOOD_LymphomaNegative regulation of myoblast fusion →+0.127+0.166<.001.00137
BLOOD_LymphomaCytoplasmic translation →+0.064+0.102<.001.00337
BLOOD_LymphomaNegative regulation of syncytium formation by plasma membrane fusion →+0.125+0.166<.001.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,291 associations by consensus.

Exploration