ARAFP1

Across TCGA patient cohorts, ARAFP1 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,769 significant associations in total. STAD shows the largest number of these associations.

The most reproducible ARAFP1-associated GO terms across cancer lineages are RNA methylation, rRNA transport, and Regulation of mitochondrial translation. Each is linked with ARAFP1 in more than 8 cancer types. Because this analysis shows association rather than direction, both ARAFP1-to-partner and partner-to-ARAFP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA methylation grouped by ARAFP1-low versus ARAFP1-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (ARAFP1→partner) and Y-score (partner→ARAFP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	RNA methylation →	+0.125	+0.042	<.001	<.001	3	9
STAD	rRNA transport →	+0.095	+0.033	<.001	<.001	3	7
STAD	Regulation of mitochondrial translation →	+0.127	+0.046	<.001	<.001	3	7
STAD	Regulation of cilium assembly →	+0.096	+0.064	<.001	<.001	3	7
STAD	Positive regulation of protein catabolic process →	+0.135	+0.040	<.001	<.001	3	7
STAD	Base-excision repair →	+0.130	+0.042	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,769 associations by consensus.

RNA methylation by ARAFP1 expression — STAD

Explore this box plot interactively →